All data is stored in hdf5 files, one for each subfigure. 
The following data is stored for each object on a subfigure (if applicable): 

xdata: x coordinate of data points 
ydata: y coordinate of data points 
zdata: z coordinate of data points 
cdata: color data of data points (rgb values) 

Data points or curves with xdata,ydata only can be plotted 
with simple plot functions, e.g. plot in Matlab. 
Data points with xdata,ydata, and zdata/cdata can be plotted 
with scatter plotting functions, e.g. scatter in Matlab. 
Surfaces can be plotted with any surface plotting functions, 
e.g. surface, pcolor, etc in Matlab.  

Any additional data will be described as needed. 

Fig. 1
Files fig1a.h5, fig1b.h5, fig1c.h5 

The (x,y,color) data for the circles is in /pts_circ. 
The (x,y,color) data for the squares is in /pts_square. 
The colorbar has 5 bins, centered at 0.1 through 0.9. 

Fig. 2
Files fig2a.h5, fig2b.h5, fig2c.h5 

The (x,y) data for the solid black lines is stored in 
/line_3m, /line_2m, /line_2p, /line_3p. 
The (x,y) data for the colored lines is stored in 
/line_1m, /line_0, /line_1p. 
The (x,y) data for the dashed line is stored in /line_dash. 
The (x,y,z,color) data for the thick horizontal shaded line 
is stored in /mode. 

Fig. 3 
Files: fig3a.h5, fig3b.h5

The (x,y) data for the lines is stored in /line_blue, /line_green, /line_red. 
The (x,y) data for the points is stored in /pts_blue, /pts_green, /pts_red. 

Fig. 4 and 5
Files: fig4a1.h5, fig4a2.h5, fig4a3.h5, fig5a1.h5, fig5a2.h5, fig5a3.h5

The (x,y) data for the cuves is stored in 
/psi1, /psi2, /psi3, /psi4, /psi5, /psi6. 
The (x,y,z,color) data for the fluctuation is stored in /db. 

Files: fig4b1.h5, fig4b2.h5, fig4b3.h5, fig5b1.h5, fig5b2.h5, fig5b3.h5

The (x,y) data for the inner circle, middle circle, outer circle, 
and radial line is stored in /line_hfs, /line_ax, /line_lfs, and /line_cut. 
The (x,y,z,color) data for the fluctuation is stored in /db. 

Files: fig4c1.h5, fig4c2.h5, fig4c3.h5, fig5c1.h5, fig5c2.h5, fig5c3.h5

The (x,y) data for the lines is stored in 
/line_blue, /line_orange, /line_gold, /line_purple, /line_green, /line_cyan. 

Fig. 6 
Files: fig6a.h5, fig6b.h5 

The (x,y) data for the solid line is stored in /line for 6a and /lines for 6b. 
The (x,y) data for the dashed line is stored in /lined for 6b. 
The (x,y,color) data for the square, circle, diamond, and pentagram points 
is stored in /ptss, /ptsc, /ptsd, /ptsp. 

Fig. 7 
Files: fig7a.h5, fig7b.h5 

The (x,y) data for the line is stored in /line. 
The (x,y,color) data for the points is stored in /pts. 

Fig. 8 
Files: fig8a.h5, fig8b.h5 

The lines have (x,y) data stored in /kline, /rline, /gline, /bline. 
The darker shaded contours have data stored in /ktop, /rtop, /gtop, /btop. 
The lighter shaded contours have data stored in /kbot, /rbot, /gbot, /bbot. 
They have an additional field called "facealpha" which describes 
their transparency. 

Fig 9
File: fig9a.h5

The dashed lines have (x,y) data stored in /dash_vert, /dash_horz
The top solid horizontal line has (x,y) data stored in /solid_horz 
The solid lines indicated integration bounds have (x,y) data 
stored in /low_bound, /up_bound
The colored integrand values have (x,y,z,color) data stored in /surf 

File: fig9b.h5 

The vertical lines have (x,y) data stored in /dash_vert, /solid_vert 
The red curve has (x,y) data stored in /gamma 

Fig 10
Files: fig10a.h5, fig10b.h5

The dashed horizontal line has (x,y) data stored in /dash_horz 
The solid curve has (x,y) data stored in /solid_curve 
The colored growth rate values have (x,y,z,color) data stored in /gamma
For 10a, the dashed curve has (x,y) data stored in /dash_curve